Alright.. earlier today i had access to my second computer and tested out ZeroBrane on and it seemed to be fine with the latest version of MobDebug so i would assume that the issue is somehow related to the computer individually, unsure what the exact issue is yet, if I do manage to figure it out i'll make sure to post back.
Update: After posting this i noticed something strange, on the computer that the debugger is not functioning correctly, the zerobrane window with flash as if it is asking for admin rights, etc. Unsure why this is happening as both computers have the "same" setup.